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Glossary
of Terms
Analyte:
Any substance that is measured, usually applied to a component of
blood or other bodily fluid.
Analyzer:
A diagnostics instrument or device used to separate substances into
their constituent parts and to determine the absence or presence and, if
present, the quantity of specific substances of compounds.
Amino
Acids: The basic building
blocks from which peptides and proteins are constructed.
The specific amino acid sequence of a peptide or protein is
governed by the nucleotide sequence contained in the gene coding for it.
There are 20 amino acids commonly found in proteins.
Antibody:
A critical immune system protein (immunoglobulin) produced by the
body’s immune system (B lymphocytes) that identifies and leads to the
clearing of a foreign substance, such as a bacterium, a virus, or
transplanted tissue. Researchers
estimate that the body produces more than 10 million antibodies, with each
antibody targeted to a specific antigen.
Antigen:
Harmful foreign substances or
“intruders,” usually a protein or carbohydrate, capable of
triggering immuno-system responses, i.e. the formation of antibodies to
react specifically with the antigen.
Bioinformatics:
The use of computers to process, analyze, store and retrieve
biological information.
Carbohydrates:
One of four major classes of molecules on which life if based.
Carbohydrates are used in energy storage, are part of the structure
of nucleic acids, form the cell walls of plant and bacterial cells, and
can be linked to proteins through a process known as glycosylation.
Choriocarcinoma:
A cancer of the placenta, or rarely, a germ cell cancer in the
testes or ovaries. Choriocarcinoma
was the first cancer to be cured by chemotherapy.
It most often occurs in Asian women and women over 40. Diagnostic procedures include a biopsy, ultrasound, nuclear
scan and human chorionic gonadotropin test (HCG).
DNA:
Short for deoxyribonucleic acid, one of two nucleic acids (along
with RNA) found in all cells. DNA
is responsible for and provides the “blue print” genetic information
for the building of living cells.
Enzymes:
Substance produced by cells in the body that can start or
accelerate chemical transformations, such as the building of new proteins
or the carrying of materials around a cell.
Gene:
The segment of DNA sequence in a chromosome involved in producing a
polypeptide chain (protein).
Gene
Therapy: The therapeutic
application of either blocking the unwanted result of a defective gene or
repairing a defective gene by inserting a new gene into the chromosome.
Genome:
Refers to all genes present within the cells of a living organism.
Genomics:
The large-scale study of the inherited genes contained in the cells
of any given organism.
Glycoprotein:
Proteins that are covalently bonded to carbohydrates.
Any of a large group of conjugated proteins in which the
non-protein substance is a carbohydrate.
Glycosylation:
The addition of carbohydrate (sugar) molecules to proteins as they
are manufactured in cells. Glycosylation
represents one of the important co-translational and post-translational
modifications of proteins.
Immunoassay:
A test of body fluids such as blood or urine for specific antigens,
antibodies and/or other biological substances.
In-vitro:
That occurring in a laboratory setting.
In-vivo:
That occurring in a living organism.
Mass
Spectrometry (MS): A technique for determining the molecular weight of a protein
at high resolution. Can be
used to determine the identity of a protein.
Molecular
Biology: General term
referring to the study of the structure and function of proteins and
nucleic acids; may be used as a synonym for genetic engineering or
recombinant DNA techniques.
Monoclonal
Antibody: A laboratory
manufactured protein produced substance that reacts with a specific
protein antigen. MOAB’s
have proven useful in diagnosing certain cancers (e.g., radioscope-linked
MOAB’s). Each MOAB is
identical and is of known antigen specificity.
Nucleic
Acids: The molecules that
carry genetic information in living cells.
DNA and RNA are nucleic acids.
Oncogenesis:
The process initiating and promoting the transition of a
non-cancerous cell to a cancerous cell through the action of biologic,
chemical or physical agents.
Peptide:
A chain of amino acids that is generally shorter than a protein.
Positive
Predictive Value (PPV): The
probability of actually having cancer when a diagnostic test result is
positive.
Proteins:
Any of a large group of naturally occurring complex organic
compounds, each a product of a specific gene, composed of large
combinations of amino acids containing various essential constituents
(e.g., carbon, hydrogen, nitrogen, and occasionally sulfur, phosphorus,
iron, iodine, etc.) of living cells.
Protein is the major source of building material to make living
things, i.e., the “construction workers” for building or replacing
muscles, blood, skin, hair, nails and the internal organs.
It is also essential for the formation of hormones, enzymes, and
antibodies among other functions. Many
proteins will serve as diagnostic markers, enabling physicians to diagnose
disease and track the progress of treatment.
Others will serve as therapeutic agents themselves, like
erythropoietin and insulin. Still
others will serve as targets for monoclonal antibody and small-molecule
drug development.
Proteome:
Refers to the complete set of proteins found within a living
organism expressed by specific cells at any given time.
The proteome of a given cell can vary depending on environmental
and other conditions including disease.
Proteomics:
The large-scale study of the proteins that the genes encode, and
their interaction in biochemical pathways in states of health and disease.
Reagant:
A chemical substance known to react in a specific way, used to
detect another substance through a chemical reaction.
RNA:
Short for ribonucleic acid, one of two nucleic acids (along with
DNA) found in all cells. RNA
transfers all genetic information from DNA (like a “construction
boss”) to proteins (construction workers) produced by the cells.
RNA tells enzymes how to build specific parts of a cell. There are three classes: messenger RNA is the template for
decoding the instructions contained in DNA, while transfer RNA and
ribosomal RNA (located in structures known as ribosomes inside cells)
follow these instructions to make proteins.
Sensitivity:
Ability of a diagnostic test to correctly identify a person who
does not have cancer or a disorder. Good
specificity means low incidence of false-negative results when the cancer
is present.
Specificity:
Ability of a diagnostic test to correctly identify a person who has
cancer or a disorder. Good
sensitivity means low incidence of false-positive results when the cancer
is not present.
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